1#ifndef VIENNA_RNA_PACKAGE_PLEX_H
2#define VIENNA_RNA_PACKAGE_PLEX_H
6#ifndef VRNA_DISABLE_BACKWARD_COMPATIBILITY
13duplexT** Lduplexfold(
const char *s1,
16 const int extension_cost,
17 const int alignment_length,
28duplexT** Lduplexfold_XS(
const char*s1,
30 const int **access_s1,
31 const int **access_s2,
34 const int alignment_length,
44duplexT** Lduplexfold_C(
const char *s1,
47 const int extension_cost,
48 const int alignment_length,
51 const char* structure,
61duplexT** Lduplexfold_CXS(
const char*s1,
63 const int **access_s1,
64 const int **access_s2,
67 const int alignment_length,
69 const char* structure,
79void freeDuplexT(
duplexT** array);
Various data structures and pre-processor macros.
Data structure for RNAduplex.
Definition: basic.h:211
int subopt_sorted
Sort output by energy.