1#ifndef VIENNA_RNA_PACKAGE_FOLD_VARS_H
2#define VIENNA_RNA_PACKAGE_FOLD_VARS_H
12#ifndef VRNA_DISABLE_BACKWARD_COMPATIBILITY
Various data structures and pre-processor macros.
bondT * base_pair
Contains a list of base pairs after a call to fold().
int fold_constrained
Global switch to activate/deactivate folding with structure constraints.
int * iindx
index array to move through pr.
int cut_point
Marks the position (starting from 1) of the first nucleotide of the second molecule within the concat...
FLT_OR_DBL * pr
A pointer to the base pair probability matrix.
int csv
generate comma seperated output
double FLT_OR_DBL
Typename for floating point number in partition function computations.
Definition: basic.h:43
Base pair stack element.
Definition: basic.h:143
The model details data structure and its corresponding modifiers.