5#ifndef VIENNA_RNA_PACKAGE_PARAMS_DEFAULT_H
6#define VIENNA_RNA_PACKAGE_PARAMS_DEFAULT_H
19extern int hairpin37[31];
20extern int hairpindH[31];
21extern int bulge37[31];
22extern int bulgedH[31];
23extern int internal_loop37[31];
24extern int internal_loopdH[31];
25extern int mismatchI37[
NBPAIRS+1][5][5];
26extern int mismatchIdH[
NBPAIRS+1][5][5];
27extern int mismatch1nI37[
NBPAIRS+1][5][5];
28extern int mismatch23I37[
NBPAIRS+1][5][5];
29extern int mismatch1nIdH[
NBPAIRS+1][5][5];
30extern int mismatch23IdH[
NBPAIRS+1][5][5];
31extern int mismatchH37[
NBPAIRS+1][5][5];
32extern int mismatchM37[
NBPAIRS+1][5][5];
33extern int mismatchHdH[
NBPAIRS+1][5][5];
34extern int mismatchMdH[
NBPAIRS+1][5][5];
35extern int mismatchExt37[
NBPAIRS+1][5][5];
36extern int mismatchExtdH[
NBPAIRS+1][5][5];
38extern int dangle5_37[
NBPAIRS+1][5];
39extern int dangle3_37[
NBPAIRS+1][5];
40extern int dangle3_dH[
NBPAIRS+1][5];
41extern int dangle5_dH[
NBPAIRS+1][5];
56extern int ML_closing37;
57extern int ML_closingdH;
58extern int ML_intern37;
59extern int ML_interndH;
63extern int MultipleCA37;
64extern int MultipleCAdH;
65extern int MultipleCB37;
66extern int MultipleCBdH;
74extern int TerminalAU37;
75extern int TerminalAUdH;
77extern int DuplexInit37;
78extern int DuplexInitdH;
80extern char Tetraloops[281];
81extern int Tetraloop37[40];
82extern int TetraloopdH[40];
83extern char Triloops[241];
84extern int Triloop37[40];
85extern int TriloopdH[40];
86extern char Hexaloops[361];
87extern int Hexaloop37[40];
88extern int HexaloopdH[40];
90extern int GQuadAlpha37;
91extern int GQuadAlphadH;
92extern int GQuadBeta37;
93extern int GQuadBetadH;
94extern int GQuadLayerMismatch37;
95extern int GQuadLayerMismatchH;
96extern int GQuadLayerMismatchMax;
98extern double Tmeasure;
Energy parameter constants.
#define NBPAIRS
Definition: constants.h:25