Package: alignprimer
Version: 1.0-1
Architecture: amd64
Maintainer: Gerald Weber <gweberbh@gmail.com>
Installed-Size: 387
Depends: libboost-regex1.74.0-icu67, libc6 (>= 2.34), libgcc-s1 (>= 3.0), libstdc++6 (>= 11), zlib1g (>= 1:1.1.4)
Filename: amd64/alignprimer_1.0-1_amd64.deb
Size: 140328
MD5sum: c08874303b04dabc63bf27bd6ca87fcc
SHA1: 908b099fcba0fb99690816b9e69ee937b59e5ff1
SHA256: 9f54cb27756253b629fdac1b6736f2912852acbd147de804438693f6f737b759
Section: Physics
Priority: extra
Homepage: <https://sites.google.com/site/geraldweberufmg/AlignPrimer>
Description: Dynamic programming alignment of PCR primers to genomes

Package: tfreg
Version: 7.1-1
Architecture: amd64
Maintainer: Gerald Weber <gweberbh@gmail.com>
Installed-Size: 20182
Depends: libboost-filesystem1.74.0 (>= 1.74.0), libboost-iostreams1.74.0 (>= 1.74.0), libboost-regex1.74.0-icu67, libc6 (>= 2.34), libgcc-s1 (>= 3.0), libgsl25 (>= 2.6), liblapack3 | liblapack.so.3, libstdc++6 (>= 11)
Filename: amd64/tfreg_7.1-1_amd64.deb
Size: 6754148
MD5sum: 09ec30f41f36cf62a631578ebb43ec2a
SHA1: fcdbbabb4a2670d4ecc313281787963ed75403e4
SHA256: 6064045f95b30a3d66b7baf69404d9839d4f9a86d8c2966239a32603ebf24ccf
Section: Physics
Priority: extra
Homepage: <https://sites.google.com/site/geraldweberufmg/tfreg>
Description: TfReg implements the calculation of Peyrard-Bishop style Hamiltonians to obtain some physical properties of DNA and RNA duplexes. The method uses the transfer matrix technique for the calculation of the classical partition function. Also, TfReg calculates the regression of experimental versus predicted melting temperatures using the equivalent melting index.

Package: vargibbs
Version: 4.1-1
Architecture: amd64
Maintainer: Gerald Weber <gweberbh@gmail.com>
Installed-Size: 30778
Depends: libboost-filesystem1.74.0 (>= 1.74.0), libboost-iostreams1.74.0 (>= 1.74.0), libboost-regex1.74.0-icu67, libc6 (>= 2.34), libgcc-s1 (>= 3.0), libgsl25 (>= 2.6), libstdc++6 (>= 11)
Filename: amd64/vargibbs_4.1-1_amd64.deb
Size: 7483132
MD5sum: 42aaccde8c2ca07e539a0b69815dfce5
SHA1: 9bc3cebfccc400398c3c3e501498f55b11be524f
SHA256: 9b2236d435bb7eba31ba1f949695c68605f62cd19a669cab56dc2198054cf347
Section: Physics
Priority: extra
Homepage: <https://sites.google.com/site/geraldweberufmg/vargibbs>
Description: Minimization method for calculating DNA nearest-neighbour thermodynamic parameters