Package: alignprimer
Version: 1.0-1
Architecture: amd64
Maintainer: Gerald Weber <gweberbh@gmail.com>
Installed-Size: 371
Depends: libboost-regex1.71.0-icu66, libc6 (>= 2.14), libgcc-s1 (>= 3.0), libstdc++6 (>= 9), zlib1g (>= 1:1.1.4)
Filename: ./amd64/alignprimer_1.0-1_amd64.deb
Size: 123196
MD5sum: 3a8f2d8fbf3025f865bf3e266b30b36a
SHA1: a6ef3a91516b66e0402ff3d9a9ee653585c22a82
SHA256: 5981510eabca19013c399c628e0e5933c21e0c33e6eefbe4dc3f6ec5ba869d84
Section: Physics
Priority: extra
Homepage: <https://sites.google.com/site/geraldweberufmg/AlignPrimer>
Description: Dynamic programming alignment of PCR primers to genomes

Package: tfreg
Version: 7.1-1
Architecture: amd64
Maintainer: Gerald Weber <gweberbh@gmail.com>
Installed-Size: 20172
Depends: libboost-filesystem1.71.0, libboost-iostreams1.71.0, libboost-regex1.71.0-icu66, libc6 (>= 2.29), libgcc-s1 (>= 3.0), libgsl23 (>= 2.5), liblapack3 | liblapack.so.3, libstdc++6 (>= 9)
Filename: ./amd64/tfreg_7.1-1_amd64.deb
Size: 6740264
MD5sum: 6976f49f997fb5f8f4b04552c8314964
SHA1: ed60619e72e2b2b737b418afa288b079d944c64a
SHA256: 534e3ecf8f1743f64ccb11dc7b8ac6d97bdbe56efbd842d3adbd6f04bf4e17e8
Section: Physics
Priority: extra
Homepage: <https://sites.google.com/site/geraldweberufmg/tfreg>
Description: TfReg implements the calculation of Peyrard-Bishop style Hamiltonians to obtain some physical properties of DNA and RNA duplexes. The method uses the transfer matrix technique for the calculation of the classical partition function. Also, TfReg calculates the regression of experimental versus predicted melting temperatures using the equivalent melting index.

Package: vargibbs
Version: 3.1-1
Architecture: amd64
Maintainer: Gerald Weber <gweberbh@gmail.com>
Installed-Size: 28566
Depends: libboost-filesystem1.71.0, libboost-iostreams1.71.0, libboost-regex1.71.0-icu66, libc6 (>= 2.29), libgcc-s1 (>= 3.0), libgsl23 (>= 2.5), libstdc++6 (>= 9)
Filename: ./amd64/vargibbs_3.1-1_amd64.deb
Size: 6662536
MD5sum: 756d434050255ef08be0bfb13f9558b1
SHA1: dfacee340c13eae64b36cd50b7985620648f7e58
SHA256: bb6be77566d08b7df06f57112221a4f6705d4d61798318d6a68f18ff6d53e575
Section: Physics
Priority: extra
Homepage: <https://sites.google.com/site/geraldweberufmg/vargibbs>
Description: Minimization method for calculating DNA nearest-neighbour thermodynamic parameters