Class PdbFile

java.lang.Object
org.snpeff.pdb.PdbFile

public class PdbFile extends Object
A structure that reads PDB files This code is similar to 'PDBFileReader' from BioJava, but the BioJava version doesn't close file descriptors and eventually produces a crash when reading many files.
Author:
pcingola
  • Constructor Details

    • PdbFile

      public PdbFile()
  • Method Details

    • getStructure

      public org.biojava.nbio.structure.Structure getStructure(String filename) throws IOException
      Opens filename, parses it and returns aStructure object .
      Throws:
      IOException