Class TestCasesAnnParse

java.lang.Object
org.snpeff.snpEffect.testCases.unity.TestCasesBase
org.snpeff.snpEffect.testCases.unity.TestCasesAnnParse

public class TestCasesAnnParse extends TestCasesBase
Test case for parsing ANN fields
  • Constructor Details

    • TestCasesAnnParse

      public TestCasesAnnParse()
  • Method Details

    • test_EffectType

      @Test public void test_EffectType()
      Make sure all effect_tpyes have appropriate impacts, regions, etc.
    • test_old_SO

      @Test public void test_old_SO()
    • test_old_SO_vcf

      @Test public void test_old_SO_vcf()
    • testCase_tfbs_ablation

      @Test public void testCase_tfbs_ablation()
      Make sure there are no exceptions thrown when parsing TFBS_abalation SO term