Class TestCasesIntegrationHgvs

java.lang.Object
org.snpeff.snpEffect.testCases.integration.TestCasesIntegrationBase
org.snpeff.snpEffect.testCases.integration.TestCasesIntegrationHgvs

public class TestCasesIntegrationHgvs extends TestCasesIntegrationBase
Test random SNP changes
Author:
pcingola
  • Constructor Details

    • TestCasesIntegrationHgvs

      public TestCasesIntegrationHgvs()
  • Method Details

    • test_02

      @Test public void test_02()
    • test_03

      @Test public void test_03()
    • test_04

      @Test public void test_04()
    • test_05

      @Test public void test_05()
    • test_06

      @Test public void test_06()
    • test_10_MixedVep_HGVS

      @Test public void test_10_MixedVep_HGVS()
    • test_11_Hg19Hgvs

      @Test public void test_11_Hg19Hgvs()
    • test_11_Hg19Hgvs_noShift

      @Test public void test_11_Hg19Hgvs_noShift()
    • test_12_BRCA_Splice_15_Hgvs

      @Test public void test_12_BRCA_Splice_15_Hgvs()
      Using non-standard splice size (15 instead of 2) may cause some HGVS annotations issues
    • test_14_splice_region_Hgvs

      @Test public void test_14_splice_region_Hgvs()
      Using non-standard splice size (15 instead of 2) may cause some HGVS annotations issues
    • test_15_hgvs_INS_intergenic

      @Test public void test_15_hgvs_INS_intergenic()
      Using non-standard splice size (15 instead of 2) may cause some HGVS annotations issues