Uses of Class
org.snpeff.fastq.FastqTrimmer
Packages that use FastqTrimmer
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Uses of FastqTrimmer in org.snpeff.fastq
Subclasses of FastqTrimmer in org.snpeff.fastqModifier and TypeClassDescriptionclass
Trim fastq sequence when: - Median quality drops below a threshold (mean is calculated every 2 bases instead of every base) - Sequence length is at least 'minBases' From Adrian Platts ...Also the sliding window was not every base.class
Trim fastq sequence when median quality drops below a threshold