Class Hierarchy
- java.lang.Object
- org.snpeff.interval.ChromosomeSimpleName
- org.snpeff.interval.CircularCorrection
- org.snpeff.interval.CytoBands
- org.snpeff.interval.ExonSpliceCharacterizer
- org.snpeff.interval.Genes (implements java.lang.Iterable<T>, java.io.Serializable)
- org.snpeff.interval.Interval (implements java.lang.Cloneable, java.lang.Comparable<T>, java.io.Serializable)
- org.snpeff.interval.Marker (implements org.snpeff.serializer.TxtSerializable)
- org.snpeff.interval.Cds (implements org.snpeff.interval.MarkerWithFrame)
- org.snpeff.interval.Chromosome
- org.snpeff.interval.Custom (implements java.lang.Iterable<T>)
- org.snpeff.interval.GffMarker
- org.snpeff.interval.Gtf2Marker
- org.snpeff.interval.GffMarker
- org.snpeff.interval.Downstream
- org.snpeff.interval.GenericMarker
- org.snpeff.interval.Genome (implements java.lang.Iterable<T>, java.io.Serializable)
- org.snpeff.interval.Intergenic
- org.snpeff.interval.IntergenicConserved
- org.snpeff.interval.IntervalAndSubIntervals<T> (implements java.lang.Iterable<T>)
- org.snpeff.interval.Gene (implements java.io.Serializable)
- org.snpeff.interval.Transcript
- org.snpeff.interval.Intron
- org.snpeff.interval.IntronConserved
- org.snpeff.interval.MarkerParentId
- org.snpeff.interval.MarkerSeq
- org.snpeff.interval.Exon (implements org.snpeff.interval.MarkerWithFrame)
- org.snpeff.interval.MicroRnaBindingSite
- org.snpeff.interval.Motif
- org.snpeff.interval.NextProt
- org.snpeff.interval.ProteinInteractionLocus
- org.snpeff.interval.ProteinProteinInteractionLocus
- org.snpeff.interval.ProteinStructuralInteractionLocus
- org.snpeff.interval.RareAminoAcid
- org.snpeff.interval.Regulation
- org.snpeff.interval.SpliceSite
- org.snpeff.interval.SpliceSiteAcceptor
- org.snpeff.interval.SpliceSiteBranch
- org.snpeff.interval.SpliceSiteBranchU12
- org.snpeff.interval.SpliceSiteDonor
- org.snpeff.interval.SpliceSiteRegion
- org.snpeff.interval.Upstream
- org.snpeff.interval.Utr
- org.snpeff.interval.Variant
- org.snpeff.interval.VariantBnd
- org.snpeff.interval.VariantNonRef
- org.snpeff.interval.VariantWithScore
- org.snpeff.interval.Marker (implements org.snpeff.serializer.TxtSerializable)
- org.snpeff.interval.IntervalComparatorByEnd (implements java.util.Comparator<T>)
- org.snpeff.interval.IntervalComparatorByStart (implements java.util.Comparator<T>)
- org.snpeff.interval.IntervalSetIterator (implements java.lang.Iterable<T>, java.util.Iterator<E>)
- org.snpeff.interval.Markers (implements java.util.Collection<E>, java.io.Serializable)
- org.snpeff.interval.MarkerUtil
Interface Hierarchy
- org.snpeff.interval.MarkerWithFrame
Enum Class Hierarchy
- java.lang.Object
- java.lang.Enum<E> (implements java.lang.Comparable<T>, java.lang.constant.Constable, java.io.Serializable)
- org.snpeff.interval.BioType
- org.snpeff.interval.Exon.ExonSpliceType
- org.snpeff.interval.FrameType
- org.snpeff.interval.Gene.GeneType
- org.snpeff.interval.GffType
- org.snpeff.interval.TranscriptSupportLevel
- org.snpeff.interval.Variant.VariantType
- java.lang.Enum<E> (implements java.lang.Comparable<T>, java.lang.constant.Constable, java.io.Serializable)