Package org.snpeff.align
Class SmithWaterman
java.lang.Object
org.snpeff.align.NeedlemanWunsch
org.snpeff.align.SmithWaterman
Smith-Waterman (local sequence alignment) algorithm for sequence alignment (short strings, since it's not memory optimized)
- Author:
- pcingola
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Constructor Summary
Constructors -
Method Summary
Methods inherited from class org.snpeff.align.NeedlemanWunsch
align, getAlignment, getAlignmentScore, getOffset, setDeletion, setMatch, setMissMatch, setUseSpace, toString
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Constructor Details
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SmithWaterman
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