Package org.snpeff.coverage
Class MarkerTypes
java.lang.Object
org.snpeff.coverage.MarkerTypes
Create a list of marker types (names or labels for markers)
- Author:
- pcingola
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Constructor Summary
Constructors -
Method Summary
Modifier and TypeMethodDescriptionvoid
getSubType
(Marker marker) Some markers have sub-typesGet marker typegetTypeRank
(Marker marker) Get marker + rank (in case of exon or intron)boolean
List of markers whose types are based on class names
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Constructor Details
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MarkerTypes
public MarkerTypes()
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Method Details
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addType
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getSubType
Some markers have sub-types- Parameters:
marker
-- Returns:
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getType
Get marker type- Parameters:
marker
-- Returns:
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getTypeRank
Get marker + rank (in case of exon or intron)- Parameters:
marker
-- Returns:
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isType
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markerTypesClass
List of markers whose types are based on class names- Returns:
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